Yes, that's technically PU/PD (though you didn't specify how long you held her). However, that may not be what's causing her to cry more. She may be going through a growth spurt. The reason Tracy suggests not using PU/PD for babies under 3 mo is because it's too stimulating for them and would only make them cry more (while you're doing it).
I suggest that, moving forward, just do pat/shhh instead of PU/PD. Whether or not PU/PD affected her sleep habits, she should go back to how she was falling asleep within 2-3 days.
Let us know if it doesn't or if there are other issues.