Hi Katt, I thought I'd chime in ... if you can try some standard, infant's Tylenol or Acetominiphen for the pain, and maybe also some eucalyptus chest rub, or a room vaporizor in addition to the crib mattress, you might have some good luck with that. If she needs her paci and has a stuffy nose, that can be tough and can make for a mess. Also sounds like she might be overtired just from the many consecutive nights of bad sleep.
Can you bump her bed time a bit earlier to try to start to compensate for that?